BrainWorks 1996 – present

 

(see also http://material.brainworks.uni-freiburg.de/publications-brainworks/brainworks.htm)

 

The lab was established at the University of Freiburg in 1996. We list here the publications that appeared since then. For more extensive lists of publications by the various members of the lab, please visit the individual members’ sites.

 

Years

 

2014 | 2013 | 2012 | 2011
2010 | 2009 |
2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001
2000 | 1999 | 1998 | 1997 | 1996

 

2014

Derix J, Yang S, Lüsebrink F, Fiederer LDJ, Schulze-Bonhage A, Aertsen A, Speck O, Ball T (2014) Visualization of the amygdalo–hippocampal border and its structural variability by 7T and 3T magnetic resonance imaging. Human Brain Mapping 35: 4316-4329 (pdf | supporting information | press1 | press2 | abstract)

Derix J, Iljina O, Weiske J, Schulze-Bonhage A, Aertsen A, Ball T (2014) From speech to thought: the neuronal basis of cognitive units in non-experimental, real-life communication investigated using ECoG. Front Hum Neurosci 8: 383. doi: 10.3389/fnhum.2014.00383 (pdf | supplementary material | press1 | press2 | abstract)

Grah G, Kumar A (2014) Wettstreit der Metaphern. Gehirn und Geist 13 (7): 60 - 65 (abstract)

Grah G, Kumar A (2014) Wettstreit der Metaphern. Gehirn und Geist - Rätsel Mensch 1 (1): 58-63 (toc)

Hahn G, Bujan AF, Frégnac Y, Aertsen A, Kumar A (2014) Communication through resonance in spiking neuronal networks. PLoS Comp Biol 10 (8): e1003811. doi: doi:10.1371/journal.pcbi.1003811 (pdf | cover | supporting information | press1 | press2 | abstract)

Yim MY, Kumar A, Aertsen A, Rotter S (2014) Impact of correlated inputs to neurons: modeling observations from in vivo intracellular recordings. J Comput Neurosci (Online First) (pdf | erratum | press | abstract)

2013

Cordeiro JG, Somerlik KH, Cordeiro KK, Aertsen A, Araujo JC, Schulze-Bonhage A (2013) Modulation of excitability by continuous low- and high-frequency stimulation in fully hippocampal kindled rats. Epilepsy Research 107: 224-230 (pdf | abstract)

Grah G, Kumar A (2013) Zittern in Zahlen. Gehirn und Geist 5: 68-73 (pdf | press)

Hammer J, Fischer J, Ruescher J, Schulze-Bonhage A, Aertsen A, Ball T (2013) The role of ECoG magnitude and phase in decoding position, velocity, and acceleration during continuous motor behavior. Front Neuroprosthetics 7: 200. doi: 10.3389/fnins.2013.00200 (pdf | abstract)

Kern M, Aertsen A, Schulze-Bonhage A, Ball T (2013) Heart cycle-related effects on event-related potentials, spectral power changes, and connectivity patterns in the human ECoG. NeuroImage 81: 178-190 (pdf | press | abstract)

Kumar A, Vlachos I, Aertsen A, Boucsein C (2013) Challenges of understanding brain function by selective modulation of neuronal subpopulations. TINS 36: 579-586 (pdf | press1 | press2 | abstract)

Milekovic T, Ball T, Schulze-Bonhage A, Aertsen A, Mehring C (2013) Detection of error related neuronal responses recorded by electrocorticography in humans during continuous movements. PloS One 8 (2): e55235. doi:10.1371/journal.pone.0055235 (pdf | press | abstract)

Pistohl T, Schmidt TSB, Ball T, Schulze-Bonhage A, Aertsen A, Mehring C (2013) Grasp detection from human ECoG during natural reach-to-grasp movements. PloS One 8 (1): e54658. doi:10.1371/journal.pone.0054658 (pdf | abstract)

Reimer ICG, Staude B, Boucsein C, Rotter S (2013) A new method to infer higher-order spike correlations from membrane potentials. J Comput Neurosci 35: 169-186 (pdf | press | abstract)

Ruescher J, Iljina O, Altenmüller DM, Aertsen A, Schulze-Bonhage A, Ball T (2013) Somatotopic mapping of natural upper- and lower-extremity movements and speech production with high gamma electrocorticography. NeuroImage 81: 164-177 (pdf | press1 | press2 | abstract)

Vlachos I, Zaytsev Y, Spreizer S, Aertsen A, Kumar A (2013) Neural system prediction and identification challenge. Front Neuroinformatics 7: 43, doi: 10.3389/fninf.2013.00043 (pdf | press | website | abstract)

Yim MY, Aertsen A, Rotter S (2013) Impact of intrinsic biophysical diversity on the activity of spiking neurons. Phys Rev E 87, 032710. doi: 10.1103/PhysRevE.87.032710 (pdf | press | abstract)

 

2012

Ball T, Breckel TPK, Mutschler I, Aertsen A, Schulze-Bonhage A, Hennig J, Speck O (2012) Variability of fMRI-response patterns at different spatial observation scales. Human Brain Mapping 33: 1155-1171 (pdf | supplementary information | press1 | press2 | abstract)

Deger M, Helias M, Boucsein C, Rotter S (2012) Statistical properties of superimposed stationary spike trains. J Comput Neurosci 32 : 443-463 (pdf | abstract)

Demandt E, Mehring C, Vogt K, Schulze-Bonhage A, Aertsen A, Ball T (2012) Reaching movement onset- and end-related characteristics of EEG spectral power modulations. Front Neuroprosthetics 6: 65, doi: 10.3389/fnins.2012.00065 (pdf | abstract)

Derix J, Iljina O, Schulze-Bonhage A, Aertsen A, Ball T (2012) "Doctor" or "darling"? Decoding the communication partner from ECoG of the anterior temporal lobe during non-experimental, real-life social interaction. Front Human Neurosci 6 : 251, doi: 10.3389/fnhum.2012.00251 (pdf | press1 | press2 | abstract)

Froriep UP, Kumar A, Cosandier-Rimélé D, Häussler U, Kilias A, Haas CA, Egert U (2012) Altered theta coupling between medial entorhinal cortex and dentate gyrus in temporal lobe epilepsy. Epilepsia 53: 1937-1947 (pdf | press | supporting information| abstract)

Milekovic T, Ball T, Schulze-Bonhage A, Aertsen A, Mehring C (2012) Error-related electrocorticographic activity in humans during continuous movements. J Neural Eng 9: 026007 (21pp), doi:10.1088/1741-2560/9/2/026007 (pdf | supplementary material 1 | supplementary material 2 | abstract)

Milekovic T, Fischer J, Pistohl T, Ruescher J, Schulze-Bonhage A, Aertsen A, Rickert J, Ball T, Mehring C (2012) An online brain-machine interface using decoding of movement direction from the human electrocorticogram. J Neural Eng 9 : 046003 (14pp), doi:10.1088/1741-2560/9/4/046003 (pdf | press1 | press2 | press3 | press4 | press5 | abstract)

Pistohl T, Schulze-Bonhage A, Aertsen A, Mehring C, Ball T (2012) Decoding natural grasp types from human ECoG. NeuroImage 59(1): 248-260 (pdf | supplementary material | press1 | press2 | abstract)

Tangermann M, Müller K-R, Aertsen A, Birbaumer N, Braun C, Brunner C, Leeb R, Mehring C, Miller KJ, Müller-Putz GR, Nolte G, Pfurtscheller G, Preissl H, Schalk G, Schlögl A, Vidaurre C, Waldert S, Blankertz B (2012) Review of the BCI competition IV. Front Neuroprosthetics 6: 55, doi: 10.3389/fnins.2012.00055 (pdf | abstract)

Thinnes-Elker F, Iljina O, Apostolides JK, Kraemer F, Schulze-Bonhage A, Aertsen A, Ball T (2012) Intention concepts and brain-machine interfacing. Front Psychology 3: 455, doi: 10.3389/fpsyg.2012.00455 (pdf | press | abstract)

Vlachos I, Aertsen A, Kumar A (2012) Beyond statistical significance: Implications of network structure on neuronal activity. PLoS Comp Biol 8(1): e1002311, doi: 10.1371/journal.pcbi.1002311 (pdf | abstract)

Voges N, Aertsen A, Rotter S (2012) Structural models of cortical networks with long-range connectivity. Math Problems in Engineering 2012: 484812, doi: 10.1155/2012/484812 (pdf | abstract)

Waldert S, Tüshaus L, Kaller CP, Aertsen A, Mehring C (2012) fNIRS exhibits weak tuning to hand movement direction. PloS One 7: 11, e49266. doi:10.1371/journal.pone.0049266 (pdf | press | abstract)

 

2011

Boucsein C, Nawrot MP, Schnepel P, Aertsen A (2011) Beyond the cortical column: Abundance and physiology of horizontal connections imply a strong role for inputs from the surround. Front Neurosci 5: 32, doi: 10.3389/fnins.2011.00032 (pdf | press1 | press2 | abstract)

Braun DA, Aertsen A, Paz R, Vaadia E, Rotter S, Mehring C (2011) Online adaptation and over-trial learning in macaque visuomotor control. Front Comput Neurosci 5: 27, doi: 10.3389/fncom.2011.00027 (pdf | abstract)

Fucke T, Suchanek D, Nawrot MP, Seamari Y, Heck DH, Aertsen A, Boucsein C (2011) Stereotypical spatiotemporal activity patterns during slow-wave activity in the neocortex. J Neurophysiol 106: 3035–3044 (pdf | abstract)

Grah G, Kremkow J, Aertsen A, Kumar A (2011) Computational Neuroscience: Wie mathematische Modelle helfen können, unser Nervensystem zu verstehen. Biospektrum 17: 1-2011: 130 (pdf)

Kumar A, Cardanobile S, Rotter S, Aertsen A (2011) The role of inhibition in generating and controlling Parkinson’s disease oscillations in the basal ganglia. Front Systems Neurosci 5: 86, doi: 10.3389/fnsys.2011.00086 (pdf | press1 | press2 | press3 | press4 | abstract)

Kumar A, Singh HP (2011) Information homeostasis as a fundamental principle governing the cell division and death. Med Hypotheses 77: 318-322, doi:10.1016/j.mehy.2011.05.003 (pdf | abstract)

Kumar A, Mehta M (2011) Frequency-dependent changes in NMDAR-dependent synaptic plasticity. Front Comput Neurosci 5:38, doi:10.3389/fncom.2011.00038 (pdf | abstract)

Somerlik KH, Cosandier-Rimélé D, Cordeiro JG, Krüger TB, Mattmüller R, Stieglitz T, Aertsen A, Schulze-Bonhage A (2011) Measuring epileptogenicity in kainic acid injected rats. Proc  5th Int IEEE/EMBS Conf on Neural Engineering (NER), pp. 188 - 191 (pdf)

Vlachos I, Herry C, Lüthi A, Aertsen A, Kumar A (2011) Context-dependent encoding of fear and extinction memories in a large-scale network model of the basal amygdala. PLoS Comp Biol 7(3): e1001104  (pdf | supplementary material | cover | press1 | press2 | abstract)

Yim MY, Aertsen A, Kumar A (2011) Significance of input correlations in striatal function. PLoS Comput Biol 7(11): e1002254. doi:10.1371/ journal.pcbi.1002254 (pdf | press1 | press2 | abstract)

 

2010

Aertsen A (2010) Foreword. In: Analysis of Parallel Spike Trains, Springer Series in Computational Neuroscience, Vol. 7, pp V-VIII. Grün S, Rotter S (eds). Springer: New York (pdf | Springer | cover)

Aertsen A (2010) Wenn beide versuchen, sich anzupassen – Von Mensch-Maschine-Schnittstellen, Cyborgs und dem Nachbau des Gehirns. Interview in: Werden wir ewig leben? Gespräche über die Zukunft von Mensch und Technologie. Tobias Hülswitt, Roman Brinzanik, Edition Unseld 30, Suhrkamp Verlag: Berlin (pdf | publisher1 | publisher2)

Braun DA, Waldert S, Aertsen A, Wolpert DM, Mehring C (2010) Structure learning in a sensorimotor association task. PLoS One (pdf | doi | abstract)

Franke F, Natora M, Boucsein C, Munk MH, Obermayer K (2010) An online spike detection and spike classification algorithm capable of instantaneous resolution of overlapping spikes. J Comput Neurosci 29 (1-2): 127-148 (pdf | abstract)

Grah G, Kremkow J, Aertsen A, Kumar A (2011) Computational Neuroscience: Wie mathematische Modelle helfen können, unser Nervensystem zu verstehen. Biospektrum 17: 1-2011: 130 (pdf)

Grün S, Diesmann M, Aertsen A (2010) Unitary event analysis. In: Analysis of Parallel Spike Trains, Springer Series in Computational Neuroscience, Vol. 7, pp 191-220. Grün S, Rotter S (eds). Springer: New York (pdf | Springer | cover)

Kremkow J, Perrinet LU, Masson GS, Aertsen A (2010) Functional consequences of correlated excitatory and inhibitory conductances in cortical networks. J Comput Neurosci 28: 579-594 (pdf | press1 | press2 | abstract)

Kremkow J, Aertsen A, Kumar A (2010) Gating of signal propagation in spiking neural networks by balanced and correlated excitation and inhibition. J Neurosci 30: 15760-15768  (pdf | press1 | press2 | abstract)

Kumar A, Rotter S, Aertsen A (2010) Spiking activity propagation in neuronal networks: reconciling different perspectives on neural coding. Nature Rev Neurosci 11: 615-627 (pdf | supplementary information | press1 | press2 | abstract)

Voges N, Guijarro C, Aertsen A, Rotter S (2010) Models of cortical networks with long-range patchy projections. J Comput Neurosci 28: 137-154 (pdf | abstract)

Voges N, Schüz A, Aertsen A, Rotter S (2010) A modeler’s view on the spatial structure of intrinsic horizontal connectivity in the neocortex. Progr Neurobiol 92: 277-292 (pdf | abstract)

 

2009

Ball T, Schulze-Bonhage A, Aertsen A, Mehring C (2009) Differential representation of arm movement direction in relation to cortical anatomy and function. J Neural Eng 6: 016006 (16pp) (pdf | doi | multimedia | abstract)

Ball T, Kern M, Mutschler I, Aertsen A, Schulze-Bonhage A (2009) Signal quality of simultaneously recorded invasive and non-invasive EEG. NeuroImage 46: 708–716 (pdf | abstract)

Boucsein C, Tetzlaff T, Meier R, Aertsen A, Naundorf B (2009) Dynamical response properties of neocortical neuron ensembles: Multiplicative versus additive noise. J Neurosci 29 (4): 1006-1010 (pdf | editorial | abstract)

Braun DA, Aertsen A, Wolpert DM, Mehring C (2009) Motor task variation induces structural learning. Current Biology 19: 352-357 (pdf | supplementary data | f1000 | press | abstract)

Braun DA, Aertsen A, Wolpert DM, Mehring C (2009) Learning optimal adaptation strategies in unpredictable motor tasks. J Neurosci 29(20): 6472-6478 (pdf | supplementary data | editorial | abstract)

Cordeiro JG, Capurro A, Aertsen A, Cordeiro KK, Araújo JC, Schulze-Bonhage A (2009) Improvement in hippocampal kindling analysis through computational processing data. Arq Neuropsiquiatr 67 (3A): 677-683 (pdf | abstract)

Davison AP, Brüderle D, Eppler J, Kremkow J, Muller E, Pecevski D, Perrinet L, Yger P (2009) PyNN: a common interface for neuronal network simulators. Frontiers in Neuroinformatics 2 (11): 1-10 (pdf | abstract)

Kirsch JA, Vlachos J, Hausmann M, Rose J, Yim MY, Aertsen A, Güntürkün O (2009) Neuronal encoding of meaning: Establishing category-selective response patterns in the avian ‘prefrontal cortex’. Behav Brain Res 198: 214-223 (pdf | press |  abstract)

Kriener B, Helias M, Aertsen A, Rotter S (2009) Correlations in spiking neuronal networks with distance dependent connections. J Comput Neurosci 27: 177-200 (pdf | abstract)

Nawrot MP, Schnepel P, Aertsen A, Boucsein C (2009) Precisely timed signal transmission in neocortical networks with reliable intermediate-range projections. Frontiers in Neural Circuits 3 (1): 1-11 (pdf | press1 | press2 | abstract)

Rickert J, Riehle A, Aertsen A, Rotter S, Nawrot MP (2009) Dynamic encoding of movement direction in motor cortical neurons. J Neurosci 29 (44): 13870-13882 (pdf | supplementary data | press | abstract)

Schulz JM, Redgrave P, Mehring C, Aertsen A, Clements KM, Wickens JR, Reynolds JNJ (2009) Short-latency activation of striatal spiny neurons via subcortical visual pathways. J Neurosci 29 (19): 6336-6347 (pdf | supplementary data | award | abstract)

Waldert S, Pistohl T, Braun C, Ball T, Aertsen A, Mehring C (2009) A review on directional information in neural signals for brain-machine interfaces. J Physiol (Paris) 103 (3-5): 244-254 (pdf | abstract)

 

2008

Ball T, Demandt E, Mutschler I, Neitzel E, Mehring C, Vogt K, Aertsen A, Schulze-Bonhage A (2008) Movement related activity in the high gamma range of the human EEG. NeuroImage 41: 302-310 (pdf | press | abstract)

Heinrich SP, Aertsen A, Bach M (2008) Oblique effects beyond low-level visual processing. Vision Res 48: 809-818 (pdf | abstract)

Kriener B, Tetzlaff T, Aertsen A, Diesmann M, Rotter S (2008) Correlations and population dynamics in cortical networks. Neural Computation 20: 2185-2226 (pdf | abstract)

Kumar A, Schrader S, Aertsen A, Rotter S (2008) The high-conductance state of cortical networks. Neural Computation 20: 1-43 (pdf | faculty1000 | press1 | press2 | abstract)

Kumar A, Rotter S, Aertsen A (2008) Conditions for propagating synchronous spiking and asynchronous firing rates in a cortical network model. J Neurosci 28: 5268-5280 (pdf | press1 | press2 | abstract)

Meier R, Dittrich H, Schulze-Bonhage A, Aertsen A (2008) Detecting epileptic seizures in long-term human EEG: A new approach to automatic online and real-time detection and classification of polymorphic seizure patterns. J Clin Neurophysiol 25 (3): 1-13 (pdf | press1 | press2 | abstract)

Meier R, Egert U, Aertsen A, Nawrot MP (2008) FIND - A unified framework for neural data analysis. Neural Networks 21 (8): 1085-1093 (pdf | abstract)

Nawrot MP, Boucsein C, Rodriguez Molina V, Riehle A, Aertsen A, Rotter S (2008) Measurement of variability dynamics in cortical spike trains. J Neurosci Meth 169: 374-390 (pdf | abstract)

Pistohl T, Ball T, Schulze-Bonhage A, Aertsen A, Mehring C (2008) Prediction of arm movement trajectories from ECoG-recordings in humans. J Neurosci Meth 167: 105-114 (pdf | award | press1 | press2 | abstract)

Tetzlaff T, Rotter S, Stark E, Abeles A, Aertsen A, Diesmann M (2008) Dependence of neuronal correlations on filter characteristics and marginal spike-train statistics. Neural Computation 20: 2133-2184 (pdf | abstract)

Waldert S, Preissl H, Demandt E, Braun C, Birbaumer N, Aertsen A, Mehring C (2008) Hand movement direction decoded from MEG and EEG. J Neurosci 28: 1000-1008 (pdf | press1 | press2 | abstract)

 

2007

Blumberg J, Rickert J, Waldert S, Schulze-Bonhage A, Aertsen A, Mehring C (2007) Adaptive classification for brain computer interfaces. Conf Proc IEEE Eng Med Biol Soc 2007; 1: 2536-2539 (pdf | abstract)

Gürel T, De Raedt L, Rotter S (2007) Ranking neurons for mining structure-activity relations in biological neural networks: NeuronRank Emergence of population synchrony in a layered network of the cat visual cortex. Neurocomputing 70: 1897-1901 (pdf)

Kremkow J, Kumar A, Rotter S, Aertsen A (2007) Emergence of population synchrony in a layered network of the cat visual cortex. Neurocomputing 70: 2069-2073 (pdf)

Meier R, Kumar A, Schulze-Bonhage A, Aertsen A (2007) Comparison of dynamical states of random networks with human EEG. Neurocomputing 70: 1843-1847 (pdf)

Meier R, Häussler U, Aertsen A, Deransart C, Depaulis A, Egert U (2007) Short term changes in bilateral hippocampal coherence precede epileptiform events. NeuroImage 38: 138-149 (pdf | abstract)

Morrison A, Aertsen A, Diesmann M (2007) Spike-timing dependent plasticity in balanced random networks. Neural Computation 19: 1437-1467 (pdf | cover | press-1 | press-2 | press-3 | press-4 | abstract)

Morrison A, Straube S, Plesser HE, Diesmann M (2007) Exact subthreshold integration with continuous spike times in discrete-time neural network simulations. Neural Computation 19: 47-79 (pdf | abstract)

Nawrot MP, Boucsein C, Rodriguez-Molina V, Aertsen A, Grün S, Rotter S (2007) Serial interval statistics of spontaneous activity in cortical neurons in vivo and in vitro. Neurocomputing 70: 1717-1722 (pdf)

Reppel M, Igelmund P, Egert U, Juchelka F, Hescheler J, Drobinskaya I (2007) Effect of cardioactive drugs on action potential generation and propagation in embryonic stem cell-derived cardiomyocytes. Cell Physiol Biochem 19:213-224 (pdf | abstract)

Rodriguez-Molina VM, Aertsen A, Heck D (2007) Spike timing and reliability in cortical pyramidal neurons: Effects of EPSC kinetics, input synchronization and background noise on spike timing. PLoS ONE 2(3): e319. doi:10.1371/journal.pone.0000319 (doi | pdf | abstract)

Shin S-L, Rotter S, Aertsen A, De Schutter E (2007) Stochastic description of complex and simple spike firing in cerebellar Purkinje cells. Europ J Neurosci 25: 785-794 (pdf | abstract)

Shin S-L, Hoebeek FE, Schonewille M, De Zeeuw CI, Aertsen A, De Schutter E (2007) Regular patterns in cerebellar Purkinje cell simple spike trains. PLoS ONE 2(5): e485. doi:10.1371/journal.pone.0000485 (doi | pdf | abstract)

Voges N, Aertsen A, Rotter S (2007) Statistical analysis of spatially embedded networks: From grid to random node positions. Neurocomputing 70: 1833-1837 (pdf)

Waldert S, Braun C, Preissl H, Birbaumer N, Aertsen A, Mehring C (2007) Decoding performance for hand movements: EEG vs. MEG. Conf Proc IEEE Eng Med Biol Soc 2007; 1: 5346-5348 (pdf | abstract)

 

2006

Backofen R, Borrmann HG, Deck W, Dedner A, De Raedt L, Desch K, Diesmann M, Geier M, Greiner A, Hess WR, Honerkamp J, Jankowski S, Krossing I, Liehr AW, Karwath A, Kloefkorn R, Pesche R, Potjans T, Roettger MC, Schmiedt-Thieme L, Schneider G, Voss B, Wiebelt B, Wienemann P, Winterer VH (2006) A bottom-up approach to grid-computing at a university: the Black-Forest-Grid Initiative. PIK 29 (2): 81-87 (pdf)

Blumberg J, Schulze-Bonhage A, Mehring C, Aertsen A, Ball T (2006) Movement onset related changes in ECoG recordings. In: Müller-Putz GR et al. (eds) Proc 3rd Internat Brain-Computer Interface Workshop and Training Course 2006. Graz University of Technology, Austria (pdf)

Egert U (2006) Networks on Chips: Spatial and temporal activity dynamics of functional networks in brain slices and cardiac tissue. In: Urban G (ed), BioMEMS, 10, p 309-349, Springer, Dordrecht, NL (pdf)

Egert U, Banach K, Meyer T (2006) Analysis of cardiac myocyte activity dynamics with microelectrode arrays. In: Taketani M, Baudry M (ed), Advances in network electrophysiology using multi electrode arrays, pp 274-290, Springer, Dordrecht, NL (pdf)

Guijarro C, Rutz S, Rothmaier K, Turiault M, Zhi Q, Naumann T, Frotscher M, Tronche F, Jackisch R, Kretz O (2006) Maturation and maintenance of cholinergic medial septum neurons require glucocorticoid receptor signaling. J Neurochemistry 97: 747-758 (doi | abs | pdf )

Kojima H, Simburger E, Boucsein C, Maruo T, Tsukada M, Okabe E, Aertsen A (2006) Ultraviolet laser beam and confocal microscopy – A system for rapid patterned photolysis. IEEE Circuits & Devices Magazine 22: 66-74 (pdf)

 

2005

Boucsein C, Nawrot MP, Rotter S, Aertsen A, Heck D (2005) Controlling synaptic input patterns in vitro by dynamic photo stimulation. J Neurophysiol 94: 2948-2958 (pdf | faculty1000 | press | abstract)

Egert U, Meyer T (2005) Heart on a chip. In: Dhein S, Delmar M (eds) Methods in Cardiovascular Research. Springer, Stuttgart, pp 431-453 (pdf)

Léger J-F, Stern EA, Aertsen A, Heck D (2005) Synaptic integration in rat frontal cortex shaped by network activity. J Neurophysiol 93: 281-293 (pdf | faculty1000 | abstract)

Morrison A, Mehring C, Geisel T, Aertsen A, Diesmann M (2005) Advancing the boundaries of high connectivity network simulation with distributed computing. Neural Computation 17: 1776-1801 (pdf | abstract)

Rickert J, Cardoso de Oliveira S, Vaadia E, Aertsen A, Rotter S, Mehring C (2005) Encoding of movement direction in different frequency ranges of motor cortical field potentials. J Neurosci 25: 8815-8824 (pdf | abstract)

 

2004

Ball T, Nawrot MP, Pistohl T, Aertsen A, Schulze-Bonhage A, Mehring C (2004) Towards an implantable brain-machine interface based on epicortical field potentials. Biomed Tech (Berlin) 49: (Suppl. 2) 756-759 (pdf)

Hescheler J, Halbach M, Egert U, Lu ZJ, Bohlen H, Fleischmann BK, Reppel M (2004) Determination of electrical properties of ES cell-derived cardiomyocytes using MEAs. Electrocardiol 37, Supplement 1: 110-116 (abstract)

Kuhn A, Aertsen A, Rotter S (2004) Neuronal integration of synaptic input in the fluctuation-driven regime. J Neurosci 24: 2345-2356 (pdf | cover-1 | cover-2 | abstract)

Mehring C, Nawrot MP, Cardoso de Oliveira S, Vaadia E, Schulze-Bonhage A, Aertsen A, Ball T (2004) Comparing information about arm movement direction in single channels of local and epicortical field potentials from monkey and human motor cortex. J Physiol (Paris) 98: 498–506 (pdf | abstract)

Schwartz O, Movellan JR, Wachtler T, Albright TD, Sejnowski TJ (2004) Spike count distributions, factorizability, and contextual effects in area V1. Neurocomputing 58-60: 893-900 (pdf)

Tetzlaff T, Morrison A, Geisel T, Diesmann M (2004) Consequences of realistic network size on the stability of embedded synfire chains. Neurocomputing 58-60: 117-121 (pdf)

Wachtler T, Dohrmann U, Hertel R (2004) Modeling color percepts of dichromats. Vision Res 44: 2843-2855 (pdf | abstract)

 

2003

Aertsen A (2003) Neural and representational models – Guest Editorial. In: Psychophysics Beyond Sensation – Laws and Invariants of Human Cognition, pp 411-416. Kaernbach C, Schröger E, Müller H (eds). Mahwah (NJ): Lawrence Erlbaum Associates Publ (pdf)

Aertsen A, Hauske G, Tsukada M (2003) Editorial – Special Issue on Dynamic Brain. Biol Cybern 88: 319-320 (pdf)

Aertsen A, Hauske G, Tsukada M (eds) (2003) Dynamic Brain. Special Issue of Biological Cybernetics (88/6). Berlin, Heidelberg, New York, Tokyo: Springer (toc)

Aviel Y, Mehring C, Abeles M, Horn D (2003) On embedding synfire chains in a balanced network. Neural Computation 15(6): 1321-1340 (pdf | abstract)

Banach K, Halbach M, Hu P, Hescheler J, Egert U (2003): Development of electrical activity in cardiac myocyte aggregates derived from mouse embryonic stem cells. Am J Physiol 284:H2114-H2123 (pdf | abstract)

Deransart C, Hellwig B, Heupel-Reuter M, Léger JF, Heck D, Lücking CH (2003) Single-unit analysis of substantia nigra pars reticulata neurons in freely behaving rats with genetic absence-epilepsy. Epilepsia 44: 1513-1520 (pdf | abstract)

Doi E, Inui T, Lee T-W, Wachtler T, Sejnowski TJ (2003) Spatio-chromatic receptive field properties derived from information-theoretic analyses of cone mosaic responses to natural scenes. Neural Computation 15(2): 397-417 (pdf | abstract)

Grün S, Riehle A, Diesmann M (2003) Effect of cross-trial non-stationarity on joint-spike events. Biol Cybern 88 (5): 335-351 (pdf | abstract)

Grün S, Riehle A, Aertsen A, Diesmann M (2003) Temporal scales of cortical interactions. Nova Acta Leopoldina NF 88 (332): 189-206 (pdf))

Gütig R, Aertsen A, Rotter S (2003) Analysis of higher-order neuronal interactions based on conditional inference. Biol Cybern 88: 352-359 (pdf | abstract)

Gütig R, Aharonov R, Rotter S, Sompolinsky H (2003) Learning input correlations through nonlinear temporally asymmetric Hebbian plasticity. J Neurosci 23: 3697-3714 (pdf | abs)

Halbach M, Egert U, Hescheler J, Banach K (2003) Estimation of action potential changes from field potential recordings in multicellular mouse cardiac myocyte cultures. Cell Physiol Biochem 13: 271-28 (pdf | abstract)

Heck D, Borst A, Antkowiak B (2003) Passive spatial and temporal integration of excitatory synaptic inputs in cerebellar Purkinje cells of young rats. Neurosci Lett 341: 79-83 (pdf | abstract)

Kuhn A, Aertsen A, Rotter S (2003) Higher-order statistics of input ensembles and the response of simple model neurons. Neural Computation 15: 67-101 (pdf | abstract)

Mehring C, Hehl U, Kubo M, Diesmann M, Aertsen A (2003) Activity dynamics and propagation of synchronous spiking in locally connected random networks. Biol Cybern 88: 395-408 (pdf | abstract)

Mehring C, Rickert J, Cardoso de Oliveira S, Vaadia E, Aertsen A, Rotter S (2003) Hints for a topographic map of tuning properties in primate motor cortex. In: Proc 1st Internat IEEE EMBS Conf on Neural Engineering, pp 28-31. Capri (Italy): IEEE (pdf)

Mehring C, Rickert J, Vaadia E, Cardoso de Oliveira S, Aertsen A, Rotter S (2003) Inference of hand movements from local field potentials in monkey motor cortex. Nature Neurosci 6: 1253-1254 (pdf | supplementary material | faculty1000 | press-1 | press-2 | press-3 | abstract)

Nawrot MP, Aertsen A, Rotter S (2003) Elimination of response latency variability in neuronal spike trains. Biol Cybern 88: 321-334 (pdf | abstract)

Nawrot MP, Pistohl T, Schrader S, Hehl U, Rodriguez V, Aertsen A (2003) Embedding living neurons into simulated neural networks. In: Proc 1st Internat IEEE EMBS Conf on Neural Engineering, pp 229-232. Capri (Italy): IEEE (pdf)

Stett A, Egert U, Guenther E, Hofmann F, Meyer Th, Nisch W, Haemmerle H (2003) Biological applications of micro electrode arrays in drug discovery and basic research. Anal Bioanal Chem 377: 486-495 (pdf | abstract)

Tetzlaff T, Buschermoehle M, Geisel T, Diesmann M (2003) The spread of rate and correlation in stationary cortical networks. Neurocomputing 52-54: 949-954 (pdf)

Wachtler T, Sejnowski TJ, Albright TD (2003) Representation of color stimuli in awake macaque primary visual cortex. Neuron 37(4): 681-691 (pdf | abstract)

Wennekers Th, Sommer F, Aertsen A (2003) Cell Assemblies – Editorial. Theory Biosci 122: 1-4 (pdf)

Wennekers Th, Sommer F, Aertsen A (eds) (2003) Cell Assemblies. Special Issue of Theory in Biosciences (122). Jena: Urban & Fischer (toc)

 

2002

Aertsen A (2002) Hishitsu dynamics to shinkei keisan kikou - jikken, kaiseki, models (Cortical dynamics and neural computation – Experiments, analysis and models). In: “Nou no Jyouhou-Hyougen (Information Coding in the Brain)”, pp 186-209 (in Japanese; translation: Ito H). Doya K, Ito H, Fujii H, Tsukada M (eds). Tokyo: Asakura Publishing

Egert U, Heck D, Aertsen A (2002) Two-dimensional monitoring of spiking networks in acute brain slices. Exp Brain Res 142: 268-274 (pdf | abstract)

Egert U, Knott Th, Schwarz C, Nawrot M, Brandt A, Rotter S, Diesmann M (2002) MEA-Tools: an open source toolbox for the analysis of multielectrode-data with Matlab. J Neurosci Meth 117:33-42 (pdf | abstract)

Egert U, Haemmerle H (2002) Application of the microelectrode-array (MEA) technology in pharmaceutical drug research. In: Baselt JP, Gerlach G (Eds) Sensoren im Fokus neuer Anwendungen. pp 51-54. w.e.b. Universitätsverlag, Dresden (pdf)

Grün S, Diesmann M, Aertsen A (2002) Unitary events in multiple single-neuron spiking activity: I. Detection and significance. Neural Computation 14: 43-80 (pdf | abstract)

Grün S, Diesmann M, Aertsen A (2002) Unitary events in multiple single-neuron spiking activity: II. Non-stationary data. Neural Computation 14: 81-119 (pdf | abstract)

Gütig R, Aertsen A, Rotter S (2002) Significance of coincident spikes: Count-based versus rate-based statistics. Neural Computation 14: 121-153 (pdf | cover | abstract)

Heck D, Sultan F.(2002) Cerebellar structure and function: making sense of parallel fibers. Hum Mov Sci 21: 411-421 (pdf | abstract)

Heck D, Kümmell F, Thach WT, Aertsen A (2002) Dynamic correlation of neuronal activity in rat cerebellar cortex modulated by behavior. Ann NY Acad Sci 978: 156-163 (pdf | abstract)

Kuhn A, Rotter S, Aertsen A (2002) Correlated input spike trains and their effects on the response of the leaky integrate-and-fire neuron. Neurocomputing 44-46: 121-126 (pdf)

Tetzlaff T, Geisel T, Diesmann M (2002) The ground state of cortical feed-forward networks. Neurocomputing 44-46: 673-678 (pdf)

Lee TW, Wachtler T, Sejnowski TJ (2002) Color opponency is an efficient representation of spectral properties in natural scenes. Vision Res 2002 42(17): 2095-103 (pdf | abstract)

 

2001

Aertsen A, Diesmann M, Gewaltig MO, Grün S, Rotter S (2001) Neural dynamics in cortical networks - precision of joint-spiking events. In: Complexity in Biological Information Processing, pp 193-207. Bock G, Goode J (eds). Novartis Foundation Symposium 239. Chichester (UK): Wiley (pdf | abstract)

Diesmann M, Gewaltig M-O, Rotter S, Aertsen A (2001) State space analysis of synchronous spiking in cortical neural networks. Neurocomputing 38-40: 565-571 (pdf)

Gewaltig MO, Diesmann M, Aertsen A (2001) Cortical synfire activity: Configuration space and survival probability. Neurocomputing 38-40: 621-626 (pdf)

Gewaltig MO, Diesmann M, Aertsen A (2001) Propagation of cortical synfire-activity: Survival probability in single trials and stability in the mean. Neural Networks 14: 657-673 (pdf | abstract)

Heck D, Sultan F (2001) Das unterschätzte Kleinhirn. Spectrum der Wissenschaft (Scientific American, German ed.) October 2001: 36-44 (pdf)

Heck D, Sultan F, Braitenberg V (2001) Sequential stimulation of rat cerebellar granular layer in vivo: further evidence for a 'tidal-wave' timing mechanism in the cerebellum. Neurocomputing 38-40: 641-646 (pdf)

Lee T-W, Wachter T, Sejnowski TJ (2001) Color opponency constitutes a sparse representation for the chromatic structure of natural scenes. Adv Neural Inf Proc Syst 13: 866-872 (pdf)

Wachter T, Lee T-W, Sejnowski TJ (2001) Chromatic structure of natural scenes. J Opt Soc Am A 18(1): 65-77 (pdf | abstract)

Wachtler T, Albright TD, Sejnowski TJ (2001) Nonlocal interactions in color perception: Nonlinear processing of chromatic signals from remote inducers. Vision Res 41(12): 1535-1546 (pdf | abstract)

 

2000

Feige B, Aertsen A, Kristeva-Feige R (2000) Dynamic synchronization between multiple cortical motor areas and muscle activity in phasic voluntary movements. J Neurophysiol 84: 2622-2629 (pdf | abstract)

Riehle A, Grammont F, Diesmann M, Grün S (2000) Dynamical changes and temporal precision of synchronized spiking activity in monkey motor cortex during movement preparation. J Physiol (Paris) 94 (5-6): 569-582 (pdf | abstract)

Rotter S, Aertsen A (2000) Cortical dynamics - Experiments and models. In: Chaos in Brain? pp 3-12. Lehnertz K, Arnhold J, Grassberger P, Elger CE (eds). Singapore: World Scientific Publ (pdf)

 

1999

Aertsen A (1999) Synchronization dynamics in cortical activity - Experiments and models. In: Video Ergo Sum, pp 77-81. Breidbach O, Clausberg K (eds). Interface 4, Verlag Hans-Bredow-Institut, Hamburg

Diesmann M, Gewaltig M-O, Aertsen A (1999) Stable propagation of synchronous spiking in cortical neural networks. Nature 402: 529-533 (pdf | abstract)

Grün S, Diesmann M, Grammont F, Riehle A, Aertsen A (1999) Detecting unitary events without discretization of time. J Neurosci Meth 94: 67-79 (pdf | abstract)

Grün S, Rotter S (1999) Concepts of neuronal cooperativity in the cortex. In: From Molecular Neurobiology to Clinical Neuroscience, p 359-363. Elsner N, Eysel U (eds). Introductory Remarks to Symposium VIII, Proc 27th Göttingen Neurobiology Conf, Vol I. Stuttgart, New York: Thieme (pdf)

Heck D (1999) Sequential stimulation of rat and guinea pig cerebellar granular cells in vitro leads to increasing population activity in parallel fibers. Neurosci.Lett 263: 137-140 (pdf | abstract)

Nawrot M, Aertsen A, Rotter S (1999) Single-trial estimation of neuronal firing rates - From single-neuron spike trains to population activity. J Neurosci Meth 94: 82-92 (pdf | abstract)

Rotter S, Diesmann M (1999) Exact digital simulation of time-invariant linear systems with applications to neuronal modeling. Biol Cybern 81(5/6): 381-402 (pdf | abstract)

 

1998

Egert U, Schlosshauer B, Fennrich S, Nisch W, Fejtl M, Knott Th, Müller T, Hämmerle H (1998) A novel organotypic long-term culture of the rat hippocampus on substrate-integrated multielectrode arrays.  Brain Res Prot 2: 229-242 (pdf | abstract)

Rotter S, Aertsen A (1998) Accurate spike synchronisation in cortex. Z. f. Naturforschung 53C: 686-689 (pdf | abstract)

Reimann S, Fuster JM, Gierer A, Mayer-Kress G, Neumann T, Roelfsema P, Rotter S, Schoner G, Stephan A, Vaadia E, Walter H (1998) Group report: Emergent properties of natural and artificial systems. Z. f. Naturforschung 53C: 770-774 (pdf | abstract)

 

1997

Aertsen A, Diesmann M, Gewaltig M-O, Heck D, Rotter S (1997) Dynamische Organisation von Hirnaktivität - Mechanismen und Funktion. (in German) Freiburger Universitätsblätter 135: 93-115

Antkowiak B, Heck D (1997) Effects of the volatile anaesthetic enflurane on spontaneous discharge rate and GABAA-mediated inhibition of Purkinje cells in rat cerebellar slices. J Neurophysiol 77 :2525-2538 (pdf | abstract)

Borst A, Heck D, Thomann M (1997) Voltage signals of individual Purkinje cell dendrites in rat cerebellar slices. Neurosci Lett 238: 29-32 (pdf | abstract)

Riehle A, Grün S, Diesmann M, Aertsen A (1997) Spike synchronization and rate modulation differentially involved in motor cortical function. Science 278: 1950-1953 (pdf | press | perspectives | abstract)

 

1996

Aertsen A (1996) Dynamic organization of cortical activity. In: IWB ‘96, pp 23-26. Proc Internat Workshop on Brainware, Tokyo (Japan)

Aertsen A et al (1996) Dynamic organization of cortical cell assemblies - Mechanisms and function. In: Life Sciences 96, p 202-203. The Weizmann Institute of Science,  Rehovot (Israel)

Aertsen A, Braitenberg V (eds) (1996) Brain Theory: Biological Basis and Computational Principles. Amsterdam, New York: Elsevier Science Publ

Aertsen A, Diesmann M, Gewaltig M-O (1996) Propagation of synchronous spiking activity in feedforward neural networks. J Physiol (Paris) 90: 243-247 (pdf | abstract)

Aertsen A, Erb M, Haalman I, Vaadia E (1996) Coherent dynamics in the frontal cortex of the behaving monkey - Experimental observations and model interpretation. In: Advances in Processing and Pattern Analysis of Biological Signals, pp 205-224. Gath I, Inbar GF (eds). New York, London: Plenum Press

Arieli A, Sterkin A, Grinvald A, Aertsen A (1996) Dynamics of ongoing activity: Explanation of the large variability in evoked cortical responses. Science 273:1868-1871 (html | perspectives | abstract)

Diesmann M, Gewaltig M-O, Aertsen A (1996) Characterization of synfire activity by propagating ‘pulse packets’. In: Computational Neuroscience – Trends in Research 1995, pp 59-64. Bower J (ed). San Diego: Academic Press

Plenz D, Aertsen A (1996) Neural dynamics in cortex-striatum co-cultures I. Anatomy and electrophysiology of neuronal cell types. Neuroscience 70: 861-891 (pdf | abstract)

Plenz D, Aertsen A (1996) Neural dynamics in cortex-striatum co-cultures. II. Spatiotemporal characteristics of neuronal activity. Neuroscience 70: 893 - 924 (pdf | abstract)

Riehle A, Grün S, Aertsen A, Requin J (1996) Signatures of dynamic cell assemblies in monkey motor cortex. In: Artificial Neural Networks – ICANN96, pp 673-678. Von der Malsburg C, Von Seelen W, Vorbrüggen JC, Sendhoff B (eds). Berlin: Springer

Rotter S (1996) Biophysical aspects of cortical networks. In: Torre V, Conti F (eds) Neurobiology: Ionic Channels, Neurons, and the Brain, 355–369. Plenum, New York (pdf)

Rotter S, Heck D, Aertsen A (1996) Spatio-temporal patterns of activity in cortical networks. In: Computational Neuroscience – Trends in Research 1995, pp 261-266. Bower J (ed). San Diego: Academic Press